JOM KITA KE POLITEKNIK

Scripting Analyses of Genomes in Ensembl Plants (Record no. 988)

MARC details
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Authentication code dc
100 10 - MAIN ENTRY--PERSONAL NAME
Personal name Contreras-Moreira, Bruno
Relator term author
245 00 - TITLE STATEMENT
Title Scripting Analyses of Genomes in Ensembl Plants
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Date of publication, distribution, etc. 2022-01-01.
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General note /pmc/articles/PMC7614177/
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General note /pubmed/35037199
520 ## - SUMMARY, ETC.
Summary, etc. Ensembl Plants (http://plants.ensembl.org) offers genome-scale information for plants, with four releases per year. As of release 47 (April 2020) it features 79 species and includes genome sequence, gene models, and functional annotation. Comparative analyses help reconstruct the evolutionary history of gene families, genomes, and components of polyploid genomes. Some species have gene expression baseline reports or variation across genotypes. While the data can be accessed through the Ensembl genome browser, here we review specifically how our plant genomes can be interrogated programmatically and the data downloaded in bulk. These access routes are generally consistent across Ensembl for other non-plant species, including plant pathogens, pests, and pollinators.
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Terms governing use and reproduction
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Terms governing use and reproduction https://creativecommons.org/licenses/by/4.0/This work is licensed under a CC BY 4.0 (https://creativecommons.org/licenses/by/4.0/) International license.
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Language note en
690 ## - LOCAL SUBJECT ADDED ENTRY--TOPICAL TERM (OCLC, RLIN)
Topical term or geographic name as entry element Article
655 7# - INDEX TERM--GENRE/FORM
Genre/form data or focus term Text
Source of term local
700 10 - ADDED ENTRY--PERSONAL NAME
Personal name Naamati, Guy
Relator term author
700 10 - ADDED ENTRY--PERSONAL NAME
Personal name Rosello, Marc
Relator term author
9 (RLIN) 2996
700 10 - ADDED ENTRY--PERSONAL NAME
Personal name Allen, James E.
Relator term author
700 10 - ADDED ENTRY--PERSONAL NAME
Personal name Hunt, Sarah E.
Relator term author
9 (RLIN) 2998
700 10 - ADDED ENTRY--PERSONAL NAME
Personal name Muffato, Matthieu
Relator term author
9 (RLIN) 2999
700 10 - ADDED ENTRY--PERSONAL NAME
Personal name Gall, Astrid
Relator term author
9 (RLIN) 3000
700 10 - ADDED ENTRY--PERSONAL NAME
Personal name Flicek, Paul
Relator term author
786 0# - DATA SOURCE ENTRY
Note Methods Mol Biol
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Uniform Resource Identifier <a href="http://dx.doi.org/10.1007/978-1-0716-2067-0_2">http://dx.doi.org/10.1007/978-1-0716-2067-0_2</a>
Public note Connect to this object online.

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