000			01759 am a22002893u 4500
042			_adc
100	1	0	_aContreras-Moreira, Bruno _eauthor
700	1	0	_aNaamati, Guy _eauthor
700	1	0	_aRosello, Marc _eauthor _92996
700	1	0	_aAllen, James E. _eauthor
700	1	0	_aHunt, Sarah E. _eauthor _92998
700	1	0	_aMuffato, Matthieu _eauthor _92999
700	1	0	_aGall, Astrid _eauthor _93000
700	1	0	_aFlicek, Paul _eauthor
245	0	0	_aScripting Analyses of Genomes in Ensembl Plants
260			_c2022-01-01.
500			_a/pmc/articles/PMC7614177/
500			_a/pubmed/35037199
520			_aEnsembl Plants (http://plants.ensembl.org) offers genome-scale information for plants, with four releases per year. As of release 47 (April 2020) it features 79 species and includes genome sequence, gene models, and functional annotation. Comparative analyses help reconstruct the evolutionary history of gene families, genomes, and components of polyploid genomes. Some species have gene expression baseline reports or variation across genotypes. While the data can be accessed through the Ensembl genome browser, here we review specifically how our plant genomes can be interrogated programmatically and the data downloaded in bulk. These access routes are generally consistent across Ensembl for other non-plant species, including plant pathogens, pests, and pollinators.
540			_a
540			_ahttps://creativecommons.org/licenses/by/4.0/This work is licensed under a CC BY 4.0 (https://creativecommons.org/licenses/by/4.0/) International license.
546			_aen
690			_aArticle
655	7		_aText _2local
786	0		_nMethods Mol Biol
856	4	1	_uhttp://dx.doi.org/10.1007/978-1-0716-2067-0_2 _zConnect to this object online.
999			_c2179 _d2179